October 13,2016
New and enhanced features for all of your DNA sequence analysis.
Sanger:
- Send primer pair sequences from Primer-BLAST runs in Sequencher Connections to your Sequencher project.
- Easily use consensus sequences from the Project Window as a reference sequence for NGS alignments for hybrid sequencing projects.
- New Batch Revert Trim Ends command.
- Ability to adjust the font size in the Project Window.
NGS:
- Faster GSNAP and BWA-MEM workflows.
- Build GSNAP Databases and BWA Indexes that can be re-used for aligning to whole genomes.
- View and save quality scores and metadata of your NGS raw data files with FastQC reports.
- Generate Variant Calling Files (VCF) to flag variants in your NGS alignments using SAMtools.
RNA-Seq:
- Expanded Cufflinks suite with the addition of Cuffquant and Cuffnorm.
- A unique Conditions and Replicates Editor for Cuffdiff and Cuffnorm.
- Enhanced RNA-Seq visualizations with custom sorting and filtering options.
- Easily manage all of your DNA-Seq and RNA-Seq projects with an enhanced External Data Browser.
June 23,2016
New features for Sanger and Next-Generation DNA Sequence Analysis include:
Sanger:
- New Batch Revert Trim Ends command.
- Ability to adjust the font size in the Project Window.
- For hybrid sequencing projects, you can create NGS reference databases/indexes directly from the consensus sequences in the Project Window in addition to linking to an external sequence.
NGS:
- GSNAP and BWA-MEM workflows now produce BAM files.
- Enhancements to the External Data Browser (EDB).
- FastQC Reports now open automatically.
December 18,2015
Gene Codes announces the release of Sequencher 5.4.1. This new release adds features to Sanger and NGS such as:
- Build GSNAP Databases and BWA Indexes that can be re-used and persisted with your project.
- Sequencher is able to handle larger genomes when aligning sequences using GSNAP and BWA.
- An updated External Data Browser that now includes a Final Run Status column that will report statuses of SUCCESS and FAILED.
- An updated External Data Browser that includes run results for new DNA-Seq options for GSNAP Databases and BWA Indexes.
- Sequencher Connections now offers the ability to send primer pair sequences returned from a Primer-BLAST run to your Sequencher project.
- Primer sequences sent to your Sequencher project from Sequencher Connections have colored bases and primer features applied to them.
September 21,2015
Gene Codes announces the release of Sequencher 5.4. This new release adds features to Sanger, NGS and RNA-Seq analyses such as:
- Expanded Cufflinks suite with the addition of Cuffquant and Cuffnorm. Sequencher 5.4 also has replicates functionality with a unique Conditions and Replicates Editor for Cuffdiff and Cuffnorm.
- Enhanced RNA-Seq visualizations with custom sorting and filtering options.
- View and save quality scores and metadata of your NGS raw data files with FastQC reports.
- Generate Variant Calling Files (VCF) to flag variants in your NGS alignments using SAMtools.
- Updated version of GSNAP which runs faster and has additional alignment modes.
- An updated External Data Browser for organizing both DNA-Seq and RNA-Seq projects.
- Sequencher Connections has improved organization and usability.
December 18,2014
Gene Codes announces the release of Sequencher 5.3. We continue to add more features for Sanger and NGS users including:
- The Cufflinks suite for RNA-Seq data ÔÇô Our user-friendly interface gives you the power of the command line without the hassle of the command line.
- Visualization tools for Differential Expression analysis.
- Enhancements to Sequencher Connections ÔÇô Our visionary tool for running multiple analyses in parallel is now more flexible and customizable.
Thank you for your consent.
We look forward to staying in touch!
Submitted by catie on Tue, 11/14/2017 - 11:27
Thank you for your interest in Sequencher.
The version of Sequencher you are trying to evaluate is not our most recent release.
So you can evaluate all of our newest features, please download and install our latest version from www.genecodes.com/download.
If you have any questions please contact us:
Email: gcinfo@genecodes.com
Phone: 734-769-7249
Toll Free: 800-497-4939
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