July,2016

Dendrimers and Polyamino-Phenolic Ligands: Activity of New Molecules Against Legionella pneumophila Biofilms

Dendrimers and Polyamino-Phenolic Ligands: Activity of New Molecules Against Legionella pneumophila Biofilms Forward and reverse sequences were analyzed and assembled using Sequencher 5.2.4 (Gene Codes Corporation, Ann Arbor, MI, USA) and blasted against Ribosomal Database Project (Cole et al., 2013).

Molecular findings of Colombian patients with type VI mucopolysaccharidosis (Maroteaux–Lamy syndrome)

The program Sequencher 5.2.4 (Gene Codes Corporation) was used for sequence analysis. Upon discovery of any discrepancy between the reference sequence (NG_007089.1) and a patient's sequence, a search was conducted at the National Center for Biotechnology Information (NCBI) database (http://www.ncbi.nlm.nih.gov/gene/411) to determine whether the variant had been previously reported.     

Hepatitis B Infection, Viral Load and Resistance in HIV-Infected Patients in Mozambique and Zambia

DNA was purified using QIAquick PCR purification kit (Qiagen, Hilden, Germany). Sanger sequencing was performed using an AB3130 genetic analyzer (Life Technologies, California, USA) and nucleotide sequences analyzed with Sequencher version 5.0 (Gene Codes Corporation, Michigan, USA). 

CRISPR/Cas9-mediated gene knockout in the mouse brain using in utero electroporation

Additionally, mapped reads with soft-clipping information were extracted from the bam file as sequence candidates with large indels. To detect large indels, the soft-clipped reads were realigned using a large gap assembly algorithm in Sequencher 5.1 (Gene Codes Corp., Ann Arbor, MI).  

A method to preserve low parasitaemia Plasmodium-infected avian blood for host and vector infectivity assays

Positive samples were cleaned and sent for sequencing to Elim Biopharmaceuticals Inc. (Hayward, California) and sequences were edited using Sequencher 5.1 (GeneCodes, Ann Arbor, Michigan). Consensus sequences then were identified using the NCBI Nucleotide Blast search.